Stem-loop aca-mir-107

Accession

MI0018714

Description

Anolis carolinensis aca-mir-107 precursor miRNA

Gene family

MIPF0000024; mir-103

Sequence

cuucucuuugcuuucAGCUUCUUUACAGUGUUGCCuuguggcauggaguucaAGCAGCAUUGUACAGGGCUAUCaaagcgcagagagucga
.((((((.((((((.((((.((.(((((((((((.(((.(((.....))))))))))))))))).))))))...)))))).))))))....

Structure

---c      u      --c    U  U           C   u   a 
    uucucu ugcuuu   AGCU CU UACAGUGUUGC uug ggc u
    |||||| ||||||   |||| || ||||||||||| ||| ||| g
    gagaga gcgaaa   UCGG GA AUGUUACGACG Aac uug g
agcu      c      CUA    -  C           -   -   a 

Annotation confidence Not enough data

Genome context

GL343219.1: 2863-2953 [-]

Mature aca-miR-107-5p

• Accession: MIMAT0021713
• Description: Anolis carolinensis aca-miR-107-5p mature miRNA
• Sequence: 16 - AGCUUCUUUACAGUGUUGCC - 35
• Evidence: experimental ; Illumina [1]

Mature aca-miR-107-3p

• Accession: MIMAT0021714
• Description: Anolis carolinensis aca-miR-107-3p mature miRNA
• Sequence: 53 - AGCAGCAUUGUACAGGGCUAUC - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107