Stem-loop aca-mir-10b

Accession

MI0018717

Description

Anolis carolinensis aca-mir-10b precursor miRNA

Gene family

MIPF0000033; mir-10

Sequence

guugucuauauaUACCCUGUAGAACCGAAUUUGUgugguauuuacacagucacAGAUUCGAUUCUAGGGGAAUauauggucgaugcaaaa
((((.((((((((.((((.(((((.((((((((((..((......))...)))))))))).))))))))).)))))))).))))......

Structure

------    u        A    G     C          -ug  au 
      guug cuauauaU CCCU UAGAA CGAAUUUGUg   gu  u
      |||| |||||||| |||| ||||| ||||||||||   ||   
      uagc gguauaUA GGGG AUCUU GCUUAGAcac   ca  u
aaaacg    u        A    -     A          uga  ca 

Annotation confidence Not enough data

Genome context

GL343356.1: 481980-482069 [-]

Mature aca-miR-10b-5p

• Accession: MIMAT0021719
• Description: Anolis carolinensis aca-miR-10b-5p mature miRNA
• Sequence: 13 - UACCCUGUAGAACCGAAUUUGU - 34
• Evidence: experimental ; Illumina [1]

Mature aca-miR-10b-3p

• Accession: MIMAT0021720
• Description: Anolis carolinensis aca-miR-10b-3p mature miRNA
• Sequence: 54 - AGAUUCGAUUCUAGGGGAAU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107