miRBase entry: aca-mir-124a-3

Stem-loop aca-mir-124a-3


Accession
MI0018722
Description
Anolis carolinensis aca-mir-124a-3 precursor miRNA
Gene family
MIPF0000021; mir-124

Literature search
1 open access papers mention aca-mir-124a-3
(2 sentences)

Sequence

ccccccagggcuuggcccuucguguucacaguggaccuugauuucauguggacacaauUAAGGCACGCGGUGAAUGCCAagagcccagccccugcccuccg
.....(((((((.(((.(((.((((((((.(((..((((((((((.....))...))))))))..))).)))))))).))).))).)).))))).......

Structure
--ccccc     -  u   c   c        a   ga        ---  a 
       caggg cu ggc cuu guguucac gug  ccuugauu   uc u
       ||||| || ||| ||| |||||||| |||  ||||||||   || g
       guccc ga ccg gaA CGUAAGUG CGC  GGAAUuaa   ag u
gccuccc     c  c   a   C        G   AC        cac  g 


Annotation confidence Not enough data
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Genome context
GL344007.1: 104523-104623 [-]

Database links

Mature aca-miR-124a

Accession MIMAT0021725
Description Anolis carolinensis aca-miR-124a mature miRNA
Sequence 59 - UAAGGCACGCGGUGAAUGCCA - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107