Stem-loop sequence aca-mir-124a-3

Accession MI0018722
Description Anolis carolinensis miR-124a-3 stem-loop
Gene family MIPF0000021; mir-124
Community annotation

This text is a summary paragraph taken from the Wikipedia entry entitled mir-124_microRNA_precursor_family. miRBase and Rfam are facilitating community annotation of microRNA families and entries in Wikipedia. Read more ...

The miR-124 microRNA precursor is a small non-coding RNA molecule that has been identified in flies (MI0000373), nematode worms (MI0000302), mouse (MI0000150) and human (MI0000443). The mature ~21 nucleotide microRNAs are processed from hairpin precursor sequences by the Dicer enzyme, and in this case originates from the 3' arm. miR-124 has been found to be the most abundant microRNA expressed in neuronal cells. Experiments to alter expression of miR-124 in neural cells did not appear to affect differentiation.

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Stem-loop
--ccccc     -  u   c   c        a   ga       uuca   g 
       caggg cu ggc cuu guguucac gug  ccuugau    ugu g
       ||||| || ||| ||| |||||||| |||  |||||||    |||  
       guccc ga ccg gaa cguaagug cgc  ggaauua    aca a
gccuccc     c  c   a   c        g   ac       ----   c 
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Genome context
Coordinates (AnoCar2.0) Overlapping transcripts
GL344007.1: 104523-104623 [-]
intergenic

Mature sequence aca-miR-124a

Accession MIMAT0021725
Sequence

59 - 

uaaggcacgcggugaaugcca

 - 79

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Evidence experimental; Solexa [1]

References

1
PMID:21775315 "MicroRNAs support a turtle + lizard clade" Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ Biol Lett. 8:104-107(2012).