miRBase entry: aca-mir-128-1

Stem-loop aca-mir-128-1


Accession
MI0018728
Description
Anolis carolinensis aca-mir-128-1 precursor miRNA
Gene family
MIPF0000048; mir-128


Sequence

cagcaauguacaguuggaagGGGGGCCGUUACACUGUAAGAgagugaguagcaggucUCACAGUGAACCGGUCUCUUUuccuacugugucacaucu
......((((((((.(((((((((((((...((((((..((((.(........).))))))))))...))))))))))))).)))))).)).....

Structure
cagcaa  -      u             UUA      AA    g gag 
      ug uacagu ggaagGGGGGCCG   CACUGU  GAga u   u
      || |||||| |||||||||||||   ||||||  |||| |    
      ac guguca ccuUUUCUCUGGC   GUGACA  CUcu g   a
-ucuac  u      u             CAA      --    g acg 


Annotation confidence Not enough data
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Genome context
chr6: 42720735-42720830 [+]

Database links

Mature aca-miR-128-5p

Accession MIMAT0021732
Description Anolis carolinensis aca-miR-128-5p mature miRNA
Sequence 21 - GGGGGCCGUUACACUGUAAGA - 41
Evidence experimental
Illumina [1]

Mature aca-miR-128-3p

Accession MIMAT0021733
Description Anolis carolinensis aca-miR-128-3p mature miRNA
Sequence 58 - UCACAGUGAACCGGUCUCUUU - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107