miRBase entry: aca-mir-129a

Stem-loop aca-mir-129a


Accession
MI0018730
Description
Anolis carolinensis aca-mir-129a precursor miRNA
Gene family
MIPF0000073; mir-129


Sequence

uuucucucucggauCUUUUUGCGGUCUGGGCUUGCuguuccuccagucagcagucaGGAAGCCCUUACCCCAAAAAGUAuuugcga
......((.((((((((((((.(((..((((((.(((((.((......)).)).))).))))))..))).))))))).))))).))

Structure
uuucuc  u     -       C   CU      G   -  c  cc 
      uc cggau CUUUUUG GGU  GGGCUU Cug uu cu  a
      || ||||| ||||||| |||  |||||| ||| || ||   
      ag guuuA GAAAAAC CCA  CCCGAA Gac ga ga  g
------  c     U       C   UU      G   u  c  cu 


Annotation confidence Not enough data
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Genome context
GL343800.1: 76641-76726 [-]

Database links

Mature aca-miR-129a-5p

Accession MIMAT0021734
Description Anolis carolinensis aca-miR-129a-5p mature miRNA
Sequence 15 - CUUUUUGCGGUCUGGGCUUGC - 35
Evidence experimental
Illumina [1]

Mature aca-miR-129a-3p

Accession MIMAT0021735
Description Anolis carolinensis aca-miR-129a-3p mature miRNA
Sequence 57 - GGAAGCCCUUACCCCAAAAAGUA - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107