miRBase entry: aca-mir-132

Stem-loop aca-mir-132


Accession
MI0018737
Description
Anolis carolinensis aca-mir-132 precursor miRNA
Gene family
MIPF0000065; mir-132


Sequence

cacggcaaccgucuccagggcaACCGUGGCUUUAGAUUGUUAcugugcggacguggguuuggUAACAGUCUACAGCCAUGGUUGguccggcggacgcaa
....((..(((((....((((((((((((((.(((((((((((((.((........)).))))))))))))).)))))))))).)))))))))..))..

Structure
cacg  aa     ucca    -          U             u  gga 
    gc  ccguc    gggc aACCGUGGCU UAGAUUGUUAcug gc   c
    ||  |||||    |||| |||||||||| ||||||||||||| ||    
    cg  ggcgg    ccug UUGGUACCGA AUCUGACAAUggu ug   g
--aa  ca     ----    G          C             u  ggu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature aca-miR-132-5p

Accession MIMAT0021745
Description Anolis carolinensis aca-miR-132-5p mature miRNA
Sequence 23 - ACCGUGGCUUUAGAUUGUUA - 42
Evidence experimental
Illumina [1]

Mature aca-miR-132-3p

Accession MIMAT0021746
Description Anolis carolinensis aca-miR-132-3p mature miRNA
Sequence 63 - UAACAGUCUACAGCCAUGGUUG - 84
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107