miRBase entry: aca-mir-146b

Stem-loop aca-mir-146b


Accession
MI0018757
Description
Anolis carolinensis aca-mir-146b precursor miRNA
Gene family
MIPF0000103; mir-146


Sequence

guuccaagcuuUGAGAACUGGUUUUCGUGGACUgguuuccauuuagucuucucagUCCAUAAUGCUCAGUUUUCCAgcuuggcugcacc
((.(((((((..((((((((((.((.(((((((((................))))))))))).)).)))))))).)))))))..))...

Structure
---  -u       uU        -  U  C         uuuccau 
   gu  ccaagcu  GAGAACUG GU UU GUGGACUgg       u
   ||  |||||||  |||||||| || || |||||||||        
   cg  gguucgA  CUUUUGAC CG AA UACCUgacu       u
cca  uc       -C        U  U  -         cuucuga 


Annotation confidence Not enough data
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Genome context
GL343301.1: 1588671-1588759 [+]

Database links

Mature aca-miR-146b-5p

Accession MIMAT0021777
Description Anolis carolinensis aca-miR-146b-5p mature miRNA
Sequence 12 - UGAGAACUGGUUUUCGUGGACU - 33
Evidence experimental
Illumina [1]

Mature aca-miR-146b-3p

Accession MIMAT0021778
Description Anolis carolinensis aca-miR-146b-3p mature miRNA
Sequence 56 - UCCAUAAUGCUCAGUUUUCCA - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107