Stem-loop aca-mir-148a

Accession

MI0018759

Description

Anolis carolinensis aca-mir-148a precursor miRNA

Gene family

MIPF0000056; mir-148

Sequence

cagauuuggucucuggaagcAAAGUUCUGUGACACUCGGACUcugauuaugauagaagUCAGUGCACUACAGAACUUUGUcgccgggggccgu
.......(((((((((..(((((((((((((.((((..(((((((.......))).))))))))...)))))))))))))..)))))))))..

Structure

cagauuu         aa             --A    CG    -   au 
       ggucucugg  gcAAAGUUCUGUG   CACU  GACU cug  u
       |||||||||  |||||||||||||   ||||  |||| |||  a
       ccgggggcc  UGUUUCAAGACAU   GUGA  CUga gau  u
-----ug         gc             CAC    --    a   ag 

Annotation confidence Not enough data

Genome context

chr6: 31781707-31781799 [-]

Mature aca-miR-148a-5p

• Accession: MIMAT0021780
• Description: Anolis carolinensis aca-miR-148a-5p mature miRNA
• Sequence: 21 - AAAGUUCUGUGACACUCGGACU - 42
• Evidence: experimental ; Illumina [1]

Mature aca-miR-148a-3p

• Accession: MIMAT0021781
• Description: Anolis carolinensis aca-miR-148a-3p mature miRNA
• Sequence: 59 - UCAGUGCACUACAGAACUUUGU - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107