Stem-loop aca-mir-150

Accession

MI0018761

Description

Anolis carolinensis aca-mir-150 precursor miRNA

Gene family

MIPF0000197; mir-150

Sequence

aaacucucuuucccucUCUCCCAACCCUUGUACCAGUGccaacuguaguccucaCUGGUACAGAGGAUGGAAGGgugggccugcagagaugagaca
...(((((((((((.((((.(((.((.(((((((((((...((....))...))))))))))).)).))).)))).))).....))))).)))...

Structure

aaa   -     -----   u    C   A  C           cca  u 
   cuc ucuuu     ccc cUCU CCA CC UUGUACCAGUG   ac g
   ||| |||||     ||| |||| ||| || |||||||||||   ||  
   gag agaga     ggg gGGA GGU GG GACAUGGUCac   ug u
aca   u     cgucc   u    A   A  A           ucc  a 

Annotation confidence Not enough data

Genome context

chr6: 80358810-80358905 [-]

Mature aca-miR-150-5p

• Accession: MIMAT0021784
• Description: Anolis carolinensis aca-miR-150-5p mature miRNA
• Sequence: 17 - UCUCCCAACCCUUGUACCAGUG - 38
• Evidence: experimental ; Illumina [1]

Mature aca-miR-150-3p

• Accession: MIMAT0021785
• Description: Anolis carolinensis aca-miR-150-3p mature miRNA
• Sequence: 55 - CUGGUACAGAGGAUGGAAGG - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107