Stem-loop aca-mir-153-2

Accession

MI0018763

Description

Anolis carolinensis aca-mir-153-2 precursor miRNA

Gene family

MIPF0000050; mir-153

Sequence

ucagugUCAUUUUUGUGAUUUGCAGCUaguaauccuggcccagUUGCAUAGUCACAAAAGUGAUcauuggccgcugugc
.((((((((((((((((((((((((((((.....))))).....)))).)))))))))))))).)))))..........

Structure

---------u     -              -    -----     u 
          cagug UCAUUUUUGUGAUU UGCA     GCUag a
          ||||| |||||||||||||| ||||     ||||| a
          guuac AGUGAAAACACUGA ACGU     cgguc u
cgugucgccg     U              U    Ugacc     c 

Annotation confidence Not enough data

Genome context

chr1: 95540871-95540949 [+]

Mature aca-miR-153-3p

• Accession: MIMAT0021786
• Description: Anolis carolinensis aca-miR-153-3p mature miRNA
• Sequence: 44 - UUGCAUAGUCACAAAAGUGAU - 64
• Evidence: experimental ; Illumina [1]

Mature aca-miR-153-5p

• Accession: MIMAT0021787
• Description: Anolis carolinensis aca-miR-153-5p mature miRNA
• Sequence: 7 - UCAUUUUUGUGAUUUGCAGCU - 27
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107