miRBase entry: aca-mir-1662

Stem-loop aca-mir-1662


Accession
MI0018767
Description
Anolis carolinensis aca-mir-1662 precursor miRNA
Gene family
MIPF0000918; mir-1662


Sequence

acugugggcUUGACAUCAUCCUACUUGAGAUguaauguaaugcaaaguCCCAAGUAGGUUGAUGUCUGGcccaagaugg
....((((((.(((((((.((((((((.(((....(((...)))..))).)))))))).))))))).))))))......

Structure
--acug      U       U        A   guaa   a 
      ugggcU GACAUCA CCUACUUG GAU    ugu  
      |||||| ||||||| |||||||| |||    ||| a
      acccGG CUGUAGU GGAUGAAC Cug    acg  
gguaga      U       U        C   --aa   u 


Annotation confidence Not enough data
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Genome context
chr6: 2558244-2558322 [+]

Database links

Mature aca-miR-1662-5p

Accession MIMAT0021794
Description Anolis carolinensis aca-miR-1662-5p mature miRNA
Sequence 10 - UUGACAUCAUCCUACUUGAGAU - 31
Evidence experimental
Illumina [1]

Mature aca-miR-1662-3p

Accession MIMAT0021795
Description Anolis carolinensis aca-miR-1662-3p mature miRNA
Sequence 49 - CCCAAGUAGGUUGAUGUCUGG - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107