Stem-loop aca-mir-181b-1

Accession

MI0018778

Description

Anolis carolinensis aca-mir-181b-1 precursor miRNA

Gene family

MIPF0000007; mir-181

Sequence

auaacggcugcaaucAACAUUCAUUGCUGUCGGUGGGuuuuagguucagucagcucucugaccaaugaaugcaaacugcagaccaga
.....(((((((.....(((((((((..(((((.(((((............))))).)))))))))))))).....))))).))...

Structure

auaac  -     aucAA         CU     U     uuagg 
     gg cugca     CAUUCAUUG  GUCGG GGGuu     u
     || |||||     |||||||||  ||||| |||||      
     cc gacgu     guaaguaac  caguc cucga     u
--aga  a     caaac         --     u     cugac 

Annotation confidence Not enough data

Genome context

GL343937.1: 20214-20300 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from aca-mir-181b-1

Mature aca-miR-181b

• Accession: MIMAT0021810
• Description: Anolis carolinensis aca-miR-181b mature miRNA
• Sequence: 16 - AACAUUCAUUGCUGUCGGUGGG - 37
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107