miRBase entry: aca-mir-202

Stem-loop aca-mir-202


Accession
MI0018804
Description
Anolis carolinensis aca-mir-202 precursor miRNA
Gene family
MIPF0000121; mir-202


Sequence

cucauuguuccuuUUUCCUAUGCAUAUACUUCUUugagaaucugaucUAAAGAGGCAUACGGCAUGGGAAaauggggcaauugaggua
(((((((((((.(((((((((((.(((.(((((((.(((......)))))))))).)))..))))))))))).))))))).))))...

Structure
---    -       u           -A   A       g   au 
   cuca uuguucc uUUUCCUAUGC  UAU CUUCUUu aga  c
   |||| ||||||| |||||||||||  ||| ||||||| |||   
   gagu aacgggg aaAAGGGUACG  AUA GGAGAAA Ucu  u
aug    u       u           GC   C       -   ag 


Annotation confidence Not enough data
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Genome context
GL343262.1: 426448-426535 [-]

Database links

Mature aca-miR-202-5p

Accession MIMAT0021848
Description Anolis carolinensis aca-miR-202-5p mature miRNA
Sequence 14 - UUUCCUAUGCAUAUACUUCUU - 34
Evidence experimental
Illumina [1]

Mature aca-miR-202-5p.2

Accession MIMAT0021849
Description Anolis carolinensis aca-miR-202-5p.2 mature miRNA
Sequence 48 - UAAAGAGGCAUACGGCAUGGGA - 69
Evidence experimental
Illumina [1]

Mature aca-miR-202-3p.1

Accession MIMAT0021850
Description Anolis carolinensis aca-miR-202-3p.1 mature miRNA
Sequence 51 - AGAGGCAUACGGCAUGGGAA - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107