Stem-loop aca-mir-216a

Accession

MI0018819

Description

Anolis carolinensis aca-mir-216a precursor miRNA

Gene family

MIPF0000054; mir-216

Sequence

aaggauggcugugaauugguuUAAUCUCAGCUGGCAACUGUGAgcaguuuccaaauccucucacagugguuucugggauuaugcuaaacacagcaauuuca
..((((.((((((..(((((.(((((((((..(((.((((((((.((..........)))))))))).))).))))))))).))))).)))))).))))..

Structure

aa    g      aa     u         CU   A        c  uuuc 
  ggau gcugug  uuggu UAAUCUCAG  GGC ACUGUGAg ag    c
  |||| ||||||  ||||| |||||||||  ||| |||||||| ||     
  uuua cgacac  aaucg auuaggguc  uug ugacacuc uc    a
ac    a      -a     u         -u   g        -  cuaa 

Annotation confidence Not enough data

Genome context

chr1: 256236287-256236387 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from aca-mir-216a

Mature aca-miR-216a

• Accession: MIMAT0021875
• Description: Anolis carolinensis aca-miR-216a mature miRNA
• Sequence: 22 - UAAUCUCAGCUGGCAACUGUGA - 43
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107