Stem-loop aca-mir-218-1

Accession

MI0018822

Description

Anolis carolinensis aca-mir-218-1 precursor miRNA

Gene family

MIPF0000026; mir-218

Sequence

uaacuuagcgagauuuucugUUGUGCUUGAUCUAACCAUGUGguugcgagguaugaguaAAACAUGGUUCUGUCAAGCACCauggaacgucacgcagcu
.......(((.(((.((((((.(((((((((..((((((((..((((.........)))).))))))))..))))))))).)))))).))).)))....

Structure

uaacuua   a   u      U         CU        Gg    gag 
       gcg gau uucugU GUGCUUGAU  AACCAUGU  uugc   g
       ||| ||| |||||| |||||||||  ||||||||  ||||   u
       cgc cug aaggua CACGAACUG  UUGGUACA  Aaug   a
---ucga   a   c      C         UC        -A    agu 

Annotation confidence Not enough data

Genome context

chr5: 75691609-75691707 [-]

Mature aca-miR-218-3p

• Accession: MIMAT0021881
• Description: Anolis carolinensis aca-miR-218-3p mature miRNA
• Sequence: 60 - AAACAUGGUUCUGUCAAGCACC - 81
• Evidence: experimental ; Illumina [1]

Mature aca-miR-218-5p

• Accession: MIMAT0021880
• Description: Anolis carolinensis aca-miR-218-5p mature miRNA
• Sequence: 21 - UUGUGCUUGAUCUAACCAUGUG - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107