miRBase entry: aca-mir-218-2

Stem-loop aca-mir-218-2


Accession
MI0018823
Description
Anolis carolinensis aca-mir-218-2 precursor miRNA
Gene family
MIPF0000026; mir-218


Sequence

ccuguuaaugggauuuuccuUUGUGCUUGAUCUAACCAUGUGguagaacaauacaaauugaacaugguucugucaagcaccauggaaggcuccaugcu
.......(((((.((((((...(((((((((..((((((((....................))))))))..)))))))))...)))))).)))))...

Structure
ccuguua     a      uUU         CU        Gguagaaca 
       auggg uuuucc   GUGCUUGAU  AACCAUGU         a
       ||||| ||||||   |||||||||  ||||||||          
       uaccu ggaagg   cacgaacug  uugguaca         u
----ucg     c      uac         uc        aguuaaaca 


Annotation confidence Not enough data
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Genome context
chr1: 112860786-112860883 [-]

Database links

Mature aca-miR-218-5p

Accession MIMAT0021880
Description Anolis carolinensis aca-miR-218-5p mature miRNA
Sequence 21 - UUGUGCUUGAUCUAACCAUGUG - 42
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107