miRBase entry: aca-mir-219-2

Stem-loop aca-mir-219-2


Accession
MI0018826
Description
Anolis carolinensis aca-mir-219-2 precursor miRNA
Gene family
MIPF0000044; mir-219


Sequence

ggagcgcugaccgcuggguccUGAUUGUCCAAACGCAAUUCUUGucuccgcuccaccgAGAGUUGAGUCUGGACAUCAggagccggagg
..........((.((((.(((((((.(((((.((.(((((((((............))))))))).)).)))))))))))).)))).))

Structure
ggagcgcuga  g    g       U     A  G         ucucc 
          cc cugg uccUGAU GUCCA AC CAAUUCUUG     g
          || |||| ||||||| ||||| || |||||||||      
          gg ggcc aggACUA CAGGU UG GUUGAGAgc     c
----------  a    g       -     C  A         caccu 


Annotation confidence Not enough data
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Genome context
GL344404.1: 882-970 [-]

Database links

Mature aca-miR-219-5p

Accession MIMAT0021884
Description Anolis carolinensis aca-miR-219-5p mature miRNA
Sequence 22 - UGAUUGUCCAAACGCAAUUCUUG - 44
Evidence experimental
Illumina [1]

Mature aca-miR-219-2-3p

Accession MIMAT0021886
Description Anolis carolinensis aca-miR-219-2-3p mature miRNA
Sequence 59 - AGAGUUGAGUCUGGACAUCA - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107