Stem-loop aca-mir-22

Accession

MI0018827

Description

Anolis carolinensis aca-mir-22 precursor miRNA

Gene family

MIPF0000053; mir-22

Sequence

gcgcagcAGUUCUUCAGCGGCAUCGCUUuacgucccuuuuaagaagcuaAAGCUGCGCAGUUGAAGAACUGUuggcc
((.(((((((((((((((.((.(.((((((.((..((....))..)))))))).).)).))))))))))))))))).

Structure

-  g               G  A C      c  cc  u 
 gc cagcAGUUCUUCAGC GC U GCUUua gu  cu u
 || ||||||||||||||| || | |||||| ||  ||  
 cg guUGUCAAGAAGUUG CG G CGAAau cg  ga u
c  -               A  C U      -  aa  a 

Annotation confidence Not enough data

Genome context

Unknown

Mature aca-miR-22-5p

• Accession: MIMAT0021887
• Description: Anolis carolinensis aca-miR-22-5p mature miRNA
• Sequence: 8 - AGUUCUUCAGCGGCAUCGCUU - 28
• Evidence: experimental ; Illumina [1]

Mature aca-miR-22-3p

• Accession: MIMAT0021888
• Description: Anolis carolinensis aca-miR-22-3p mature miRNA
• Sequence: 50 - AAGCUGCGCAGUUGAAGAACUGU - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107