Stem-loop aca-mir-26-1

Accession

MI0018835

Description

Anolis carolinensis aca-mir-26-1 precursor miRNA

Gene family

MIPF0000043; mir-26

Literature search

1 open access papers mention aca-mir-26-1
(2 sentences)

Sequence

guaacaggacuguggccaguUUCAAGUAAUCCAGGAUAGGcuguggguacugaugucagCCUGUUCUUGAUUACUUGGCCUuggaggcagccggug
...((.((.((((..((((..((((((((((.(((((((((((.............))))))))))).))))))))))..))))..)))))).)).

Structure

gua  a  a    gg    uU          C           ugggu 
   ac gg cugu  ccag  UCAAGUAAUC AGGAUAGGcug     a
   || || ||||  ||||  |||||||||| |||||||||||     c
   ug cc gacg  gguU  GGUUCAUUAG UCUUGUCCgac     u
--g  g  -    ga    CC          U           uguag 

Annotation confidence Not enough data

Genome context

chr1: 88581308-88581403 [-]

Mature aca-miR-26-5p

• Accession: MIMAT0021902
• Description: Anolis carolinensis aca-miR-26-5p mature miRNA
• Sequence: 21 - UUCAAGUAAUCCAGGAUAGG - 40
• Evidence: experimental ; Illumina [1]

Mature aca-miR-26-1-3p

• Accession: MIMAT0021903
• Description: Anolis carolinensis aca-miR-26-1-3p mature miRNA
• Sequence: 60 - CCUGUUCUUGAUUACUUGGCCU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107