miRBase entry: aca-mir-383

Stem-loop aca-mir-383


Accession
MI0018864
Description
Anolis carolinensis aca-mir-383 precursor miRNA
Gene family
MIPF0000137; mir-383


Sequence

cuccucAGAUCAGAAGGUGAUUGUGGCuuugcuuuuauaugaaacagcCACAGCACUGCCUGGUCAGAAagag
(((.((.((((((..((((.((((((((...(........)....))))))))))))..)))))).))..)))

Structure
   -c  A      AA    A        -uug uuu 
cuc  uc GAUCAG  GGUG UUGUGGCu    c   u
|||  || ||||||  |||| ||||||||    |    
gag  AG CUGGUC  UCAC GACACcga    g   a
   aA  A      CG    -        caaa uau 


Annotation confidence Not enough data
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Genome context
chr5: 106709391-106709463 [-]

Database links

Mature aca-miR-383-5p

Accession MIMAT0021952
Description Anolis carolinensis aca-miR-383-5p mature miRNA
Sequence 7 - AGAUCAGAAGGUGAUUGUGGC - 27
Evidence experimental
Illumina [1]

Mature aca-miR-383-3p

Accession MIMAT0021953
Description Anolis carolinensis aca-miR-383-3p mature miRNA
Sequence 49 - CACAGCACUGCCUGGUCAGAA - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107