Stem-loop aca-mir-457

Accession

MI0018873

Description

Anolis carolinensis aca-mir-457 precursor miRNA

Gene family

MIPF0000006; mir-15

Sequence

ggccggucccgcucCAGCAGCACUUCAAUAUUGGCAguguccacccccuccggccgCCAGUAUUGCCUGUGCUGCUCCAggggggcucggca
.(((((((((.((..((((((((..((((((((((.(.(((..........))))))))))))))...))))))))..)).))))).)))).

Structure

g    -     g  cC        -UU          A u   cacc 
 gccg guccc cu  AGCAGCAC   CAAUAUUGGC g guc    c
 |||| ||||| ||  ||||||||   |||||||||| | |||     
 cggc cgggg gA  UCGUCGUG   GUUAUGACCg c cgg    c
a    u     g  CC        UCC          - -   ccuc 

Annotation confidence Not enough data

Genome context

Unknown

Mature aca-miR-457-5p

• Accession: MIMAT0021967
• Description: Anolis carolinensis aca-miR-457-5p mature miRNA
• Sequence: 15 - CAGCAGCACUUCAAUAUUGGCA - 36
• Evidence: experimental ; Illumina [1]

Mature aca-miR-457-3p

• Accession: MIMAT0021968
• Description: Anolis carolinensis aca-miR-457-3p mature miRNA
• Sequence: 57 - CCAGUAUUGCCUGUGCUGCUCCA - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107