Stem-loop aca-mir-458

Accession

MI0018874

Description

Anolis carolinensis aca-mir-458 precursor miRNA

Gene family

MIPF0000179; mir-458

Sequence

gugcagauggcagcgccauuuuuggagcuauaaacacucucacugucAUAGCUCUUUGAAUGGUACUGCcauauguac
(((((.(((((((.(((((((..((((((((..(((.......))).))))))))..))))))).))))))).)))))

Structure

     g       c       uu        aa   cu 
gugca auggcag gccauuu  ggagcuau  aca  c
||||| ||||||| |||||||  ||||||||  |||  u
caugu uacCGUC UGGUAAG  UCUCGAUA  ugu  c
     a       A       UU        -c   ca 

Annotation confidence Not enough data

Genome context

chr2: 121791160-121791237 [-]

Mature aca-miR-458

• Accession: MIMAT0021969
• Description: Anolis carolinensis aca-miR-458 mature miRNA
• Sequence: 48 - AUAGCUCUUUGAAUGGUACUGC - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107