miRBase entry: aca-mir-727

Stem-loop aca-mir-727


Accession
MI0018886
Description
Anolis carolinensis aca-mir-727 precursor miRNA
Gene family
MIPF0001371; mir-727


Sequence

uugcccuguaugucauuuUCAGUCUUCAAUUCCUCCCAgcccguuaaauggaaaaggugaGUUGAGGCGAGUUGAAGACUaaaaaugcugugcagauuca
.....(((((((.((((((.((((((((((((..((((((((.((........)).).).)))).)).)))))))))))).)))))).))))))).....

Structure
uugcc       u      C            CU  -    - - g  aaa 
     cuguaug cauuuU AGUCUUCAAUUC  CC CAgc c c uu   u
     ||||||| |||||| ||||||||||||  || |||| | | ||    
     gacgugu guaaaa UCAGAAGUUGAG  GG GUUG g g aa   g
acuua       c      a            -C  A    a u g  aag 


Annotation confidence Not enough data
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Genome context
chr3: 28511667-28511766 [+]

Database links

Mature aca-miR-727-5p

Accession MIMAT0021987
Description Anolis carolinensis aca-miR-727-5p mature miRNA
Sequence 19 - UCAGUCUUCAAUUCCUCCCA - 38
Evidence experimental
Illumina [1]

Mature aca-miR-727-3p

Accession MIMAT0021988
Description Anolis carolinensis aca-miR-727-3p mature miRNA
Sequence 61 - GUUGAGGCGAGUUGAAGACU - 80
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107