Stem-loop aca-mir-875

Accession

MI0018887

Description

Anolis carolinensis aca-mir-875 precursor miRNA

Gene family

MIPF0000424; mir-875

Sequence

uguuuagugguacAAUACCUCAGCCUUAUCAGGUguuguauauauucaccuggaaguacugagguugaguuucacugaac
.(((((((((.((...(((((((.(((.(((((((...........))))))))))..)))))))...)).)))))))))

Structure

u         u  AAU       -C   A       uugu 
 guuuagugg ac   ACCUCAG  CUU UCAGGUg    a
 ||||||||| ||   |||||||  ||| |||||||    u
 caagucacu ug   uggaguc  gaa gguccac    a
-         u  agu       au   -       uuau 

Annotation confidence Not enough data

Genome context

GL343394.1: 621987-622066 [+]

Mature aca-miR-875

• Accession: MIMAT0021989
• Description: Anolis carolinensis aca-miR-875 mature miRNA
• Sequence: 14 - AAUACCUCAGCCUUAUCAGGU - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107