miRBase entry: aca-mir-9-2

Stem-loop aca-mir-9-2


Accession
MI0018889
Description
Anolis carolinensis aca-mir-9-2 precursor miRNA
Gene family
MIPF0000014; mir-9

Literature search
1 open access papers mention aca-mir-9-2
(2 sentences)

Sequence

gagggccguuucugUCUUUGGUUAUCUAGCUGUAugaguguaaucgacccaucauaaagcuagauaaccgaaaguagaaaugacucc
..(((.((((((((.((((((((((((((((.(((((..((.....))...))))).)))))))))))).)))))))))))).))).

Structure
ga   c        U    -            G     -gu  a 
  ggg cguuucug CUUU GGUUAUCUAGCU UAuga   gu a
  ||| |||||||| |||| |||||||||||| |||||   || u
  cuc guaaagau gaaa ccaauagaucga auacu   ca c
-c   a        -    g            a     acc  g 


Annotation confidence Not enough data
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Genome context
GL343444.1: 370592-370678 [+]

Database links

Mature aca-miR-9-5p

Accession MIMAT0021990
Description Anolis carolinensis aca-miR-9-5p mature miRNA
Sequence 15 - UCUUUGGUUAUCUAGCUGUA - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107