miRBase entry: aca-mir-92a-2

Stem-loop aca-mir-92a-2

Accession

MI0018892

Description

Anolis carolinensis aca-mir-92a-2 precursor miRNA

Gene family

MIPF0000013; mir-25

Sequence

ggaggaacugacuucucccuggguugggauuuguugcauuacuuguggguucccugaacagUAUUGCACUUGUCCCGGCCUGUggaggaggagcggaga
.......(((.(((((((((((((((((((..((.(((.((((.(((((...)))..)))))).)))))..))))))))))..)).))))))))))...

Structure

ggaggaa   a       -  --          uu  u   u    u  --   u 
       cug cuucucc cu  ggguugggau  gu gca uacu gu  ggg  
       ||| ||||||| ||  ||||||||||  || ||| |||| ||  ||| u
       ggc gaggagg gg  UCCGGCCCUG  CA CGU AUga ca  ucc  
----aga   -       a  UG          UU  -   U    -  ag   c

Annotation confidence Not enough data

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Genome context

GL344214.1: 24426-24524 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from aca-mir-92a-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature aca-miR-92a

Accession	MIMAT0021993
Description	Anolis carolinensis aca-miR-92a mature miRNA
Sequence	62 - UAUUGCACUUGUCCCGGCCUGU - 83
Evidence	experimental Illumina [1]

References

PubMed ID: 21775315
MicroRNAs support a turtle + lizard clade
"Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
"Biol Lett (2012) 8:104-107