miRBase entry: aca-mir-5425

Stem-loop aca-mir-5425


Accession
MI0018928
Description
Anolis carolinensis aca-mir-5425 precursor miRNA


Sequence

gcagggcaacagagucaccgcuucugccaagcuuucuggugaaacacaagcUUGGCAGAAGGGAUGACUCUGuugcccccu
...((((((((((((((((.((((((((((((((..((......)).)))))))))))))))).))))))))))))))...

Structure
gca              -  g              uc  gu 
   gggcaacagaguca cc cuucugccaagcuu  ug  g
   |||||||||||||| || ||||||||||||||  ||   
   cccguuGUCUCAGU GG GAAGACGGUUcgaa  ac  a
ucc              A  -              -c  aa 


Annotation confidence Not enough data
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Genome context
chr5: 32296656-32296736 [+]

Database links

Mature aca-miR-5425

Accession MIMAT0022045
Description Anolis carolinensis aca-miR-5425 mature miRNA
Sequence 52 - UUGGCAGAAGGGAUGACUCUG - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107