Stem-loop aca-mir-5428

Accession

MI0018931

Description

Anolis carolinensis aca-mir-5428 precursor miRNA

Sequence

ggcagguucccuuucuugacuUCUAACUAGCCUCCAGCUGCCAcuuguuuugccuuggcagcugguggcuaguuaggggucacgaaaggggcaucaucaga
....(((((((((((.((((((((((((((((.((((((((((............)))))))))).)))))))))))))))).)))))))).)))......

Structure

--ggca   -        u                U          cuugu 
      ggu ucccuuuc ugacuUCUAACUAGCC CCAGCUGCCA     u
      ||| |||||||| |||||||||||||||| ||||||||||      
      cua ggggaaag acuggggauugaucgg ggucgacggu     u
agacua   c        c                u          uccgu 

Annotation confidence Not enough data

Genome context

GL343194.1: 3690068-3690168 [+]

Mature aca-miR-5428

• Accession: MIMAT0022049
• Description: Anolis carolinensis aca-miR-5428 mature miRNA
• Sequence: 22 - UCUAACUAGCCUCCAGCUGCCA - 43
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107