Stem-loop aca-mir-5439

Accession

MI0018942

Description

Anolis carolinensis aca-mir-5439 precursor miRNA

Sequence

gcugaggcgaagcagggcucaaaggagaagcagcgccggccucgucUCGCUUCUCCUCAGAGCUCCGCcgccucucc
...((((((..((.((((((..(((((((((((((.......)).)).)))))))))..)))))).))))))))...

Structure

gcu      aa  a      aa         -  -  cc 
   gaggcg  gc gggcuc  aggagaagc ag cg  g
   ||||||  || ||||||  ||||||||| || ||  g
   cuccgc  CG CUCGAG  UCCUCUUCG Uc gc  c
ccu      --  C      AC         C  u  uc 

Annotation confidence Not enough data

Genome context

GL343364.1: 57245-57321 [+]

Mature aca-miR-5439

• Accession: MIMAT0022061
• Description: Anolis carolinensis aca-miR-5439 mature miRNA
• Sequence: 47 - UCGCUUCUCCUCAGAGCUCCGC - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107