miRBase entry: aca-mir-5440

Stem-loop aca-mir-5440


Accession
MI0018943
Description
Anolis carolinensis aca-mir-5440 precursor miRNA


Sequence

caguugccauuacagugguccuucacuccuccuggcaugccauuucuacaugUCAGGAGGACUGAAGGACCACauuaauggcagucg
...(((((((((..(((((((((((.(((((((((((((.........))))))))))))).)))))))))))..)))))))))...

Structure
cag         ca           c             cca 
   uugccauua  gugguccuuca uccuccuggcaug   u
   |||||||||  ||||||||||| |||||||||||||   u
   gacgguaau  CACCAGGAAGU AGGAGGACUguac   u
gcu         ua           C             auc 


Annotation confidence Not enough data
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Genome context
GL343283.1: 61023-61109 [-]

Database links

Mature aca-miR-5440

Accession MIMAT0022062
Description Anolis carolinensis aca-miR-5440 mature miRNA
Sequence 53 - UCAGGAGGACUGAAGGACCAC - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107