miRBase entry: aca-mir-5443

Stem-loop aca-mir-5443


Accession
MI0018946
Description
Anolis carolinensis aca-mir-5443 precursor miRNA


Sequence

ugacuaagcugucaaucaaaguacuuguuguacaugacugugacacugaauccaUGUAGAACAAGGAUUUUGAUuggcaguuggaaa
......((((((((((((((((.((((((.((((((................)))))).)))))).)))))))))))))))).....

Structure
ugacua                a      g      acuguga 
      agcugucaaucaaagu cuuguu uacaug       c
      |||||||||||||||| |||||| ||||||        
      uugacgguUAGUUUUA GAACAA AUGUac       a
-aaagg                G      G      cuaaguc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr1: 82315569-82315655 [+]

Database links

Mature aca-miR-5443

Accession MIMAT0022065
Description Anolis carolinensis aca-miR-5443 mature miRNA
Sequence 55 - UGUAGAACAAGGAUUUUGAU - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107