Stem-loop sequence aca-mir-5452

Accession MI0018956
Description Anolis carolinensis miR-5452 stem-loop
Stem-loop 
-  a  -    c     ug       u    c  c    gucca 
 ga gg gggg accuu  gcccucc guug ug ugga     g
 || || |||| |||||  ||||||| |||| || ||||     c
 cu cc cccc uggag  cgggagg cgac ac accu     u
a  -  a    u     gu       c    a  a    aacuc
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Genome context
Coordinates (AnoCar2.0) Overlapping transcripts
GL343282.1: 1468391-1468478 [+]
sense
Clustered miRNAs
< 10kb from aca-mir-5452
aca-mir-5452 GL343282.1: 1468391-1468478 [+]
aca-mir-5408a GL343282.1: 1472516-1472599 [-]
aca-mir-5406 GL343282.1: 1474906-1474981 [-]
aca-mir-5407 GL343282.1: 1475305-1475385 [-]

Mature sequence aca-miR-5452-5p

Accession MIMAT0022075
Previous IDs aca-miR-5452
Sequence

16 -  

uggcccuccuguugcugcug

 - 35

Get sequence
Evidence experimental; Solexa [1]

Mature sequence aca-miR-5452-3p

Accession MIMAT0022076
Previous IDs aca-miR-5452*
Sequence

53 -  

caacaacagccggagggcugg

 - 73

Get sequence
Evidence experimental; Solexa [1]

References

1
PMID:21775315 "MicroRNAs support a turtle + lizard clade" Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ Biol Lett. 8:104-107(2012).