miRBase entry: aca-mir-5444b

Stem-loop aca-mir-5444b


Accession
MI0018965
Description
Anolis carolinensis aca-mir-5444b precursor miRNA
Gene family
MIPF0001358; mir-5444


Sequence

gcaugcuucuuucaagCUCUGUUAGCAUGAACUAGGCUucaagauuccaaaagccuaguucaugucaagagagugugaagaaagcaaga
...(((((.(((((.(((((.((.(((((((((((((((...........))))))))))))))).)).))))).))))).)))))...

Structure
gca     c     a     G  A               caag 
   ugcuu uuuca gCUCU UU GCAUGAACUAGGCUu    a
   ||||| ||||| ||||| || |||||||||||||||    u
   acgaa gaagu ugaga aa uguacuugauccgaa    u
aga     a     g     g  c               aacc 


Annotation confidence Not enough data
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Genome context
chr2: 20862194-20862282 [+]

Database links

Mature aca-miR-5444b

Accession MIMAT0022087
Description Anolis carolinensis aca-miR-5444b mature miRNA
Sequence 17 - CUCUGUUAGCAUGAACUAGGCU - 38
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107