Stem-loop aca-mir-5469

Accession

MI0018977

Description

Anolis carolinensis aca-mir-5469 precursor miRNA

Sequence

cucuuacagguuucaUAAUGUAUUUUGGAUUUCAGGUuaugggauguuuaaccugaacuucagacuacauuuuuaaauguguaaugg
...(((((.((((...((((((.((((((.(((((((((.........))))))))).)))))).))))))...)))).)))))...

Structure

cuc     g    caU      U      U         ugg 
   uuaca guuu   AAUGUA UUUGGA UUCAGGUua   g
   ||||| ||||   |||||| |||||| |||||||||   a
   aaugu uaaa   uuacau agacuu aaguccaau   u
ggu     g    uuu      c      c         uug 

Annotation confidence Not enough data

Genome context

chr2: 54649293-54649379 [+]

Mature aca-miR-5469

• Accession: MIMAT0022102
• Description: Anolis carolinensis aca-miR-5469 mature miRNA
• Sequence: 16 - UAAUGUAUUUUGGAUUUCAGGU - 37
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107