Stem-loop aau-MIR2086

Accession

MI0018983

Description

Acacia auriculiformis aau-MIR2086 precursor miRNA

Gene family

MIPF0001302; MIR2086

Literature search

1 open access papers mention aau-MIR2086
(7 sentences)

Sequence

ugcuuuccuccugguauauuuugcauuugcugguuucuuuaagaggaaaucgagcaacaaguGACAUGAAUGCAGAACUGGAAagau
..((((((.....((((.((.((((((((((((((((((....)))))))).)))))...))).)).))))))......))))))..

Structure

ug      -uccug    a  u  -   ---     -        u 
  cuuucc      guau uu ug cau   uugcu gguuucuu a
  ||||||      |||| || || |||   ||||| ||||||||  
  gaAAGG      CGUA AG AC Gug   aacga cuaaagga a
ua      UCAAGA    -  U  A   aac     g        g 

Annotation confidence Not enough data

Genome context

Unknown

Mature aau-miR2086

• Accession: MIMAT0022676
• Description: Acacia auriculiformis aau-miR2086 mature miRNA
• Sequence: 63 - GACAUGAAUGCAGAACUGGAA - 83
• Evidence: not_experimental

References

1. PubMed ID: 21729267
   Identification of lignin genes and regulatory sequences involved in secondary cell wall formation in Acacia auriculiformis and Acacia mangium via de novo transcriptome sequencing
   Wong MM, Cannon CH, Wickneswari R
   BMC Genomics (2011) 12:342