miRBase entry: osa-MIR5523

Stem-loop osa-MIR5523


Accession
MI0019042
Description
Oryza sativa osa-MIR5523 precursor miRNA


Sequence

uacuagaaaacaaguaaguguaauucccccuaaacauuaaaauauguugacaUGAGGAGGAACAUAUUUACUAGuuauauuguc
........(((.(((((((((..(((((((..(((((......))))).....).)).)))).))))))))).)))........

Structure
uacuagaa   a         aa    -  - ---ua     ua 
        aac aguaagugu  uucc cc c     aacau  a
        ||| |||||||||  |||| || |     |||||   
        uuG UCAUUUAUA  AAGG GG G     uugua  a
cuguuaua   A         -C    A  A Uacag     ua 


Annotation confidence Not enough data
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Genome context
Chr4: 18205674-18205757 [-]

Database links

Mature osa-miR5523

Accession MIMAT0022157
Description Oryza sativa osa-miR5523 mature miRNA
Sequence 53 - UGAGGAGGAACAUAUUUACUAG - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21679406
    Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa
    Wei LQ, Yan LF, Wang T
    Genome Biol (2011) 12:R53