Stem-loop sbi-MIR5565d

Accession

MI0019109

Description

Sorghum bicolor sbi-MIR5565d precursor miRNA

Gene family

MIPF0001279; MIR5565

Sequence

gauucACUUCAAUCCAUGUAUGUUGGUGUggguugggguggaauuuaguucaaauucuacuccaauccaccucaacacauguggauugauguaaauccgacuacaucaa
((((.((.(((((((((((.((((((.(((((((((((((((((((.....))))))))))))))))))).)))))).))))))))))).)).))))............

Structure

------------    c  U           A      U                   a 
            gauu AC UCAAUCCAUGU UGUUGG GUggguugggguggaauuu g
            |||| || ||||||||||| |||||| ||||||||||||||||||| u
            cuaa ug aguuaggugua acaacu caccuaaccucaucuuaaa u
aacuacaucagc    a  u           c      c                   c 

Annotation confidence Not enough data

Genome context

chr1: 50256006-50256114 [+]

Mature sbi-miR5565d

• Accession: MIMAT0022254
• Description: Sorghum bicolor sbi-miR5565d mature miRNA
• Sequence: 6 - ACUUCAAUCCAUGUAUGUUGGUGU - 29
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21907786
   Identification and temporal expression analysis of conserved and novel microRNAs in Sorghum
   "Zhang L, Zheng Y, Jagadeeswaran G, Li Y, Gowdu K, Sunkar R"
   "Genomics (2011) 98:460-468