Stem-loop hsa-mir-548at

Accession

MI0019137

Symbol

HGNC: MIR548AT

Description

Homo sapiens hsa-mir-548at precursor miRNA

Literature search

56 open access papers mention hsa-mir-548at
(170 sentences)

Sequence

114 reads, 3 reads per million, 28 experiments

AAAAGUUAUUGCGGUUUUGGCUgccaaaagaaauggcCAAAACCGCAGUAACUUUUGU
((((((((((((((((((((((............))))))))))))))))))))))..

Structure

--                      gccaa 
  AAAAGUUAUUGCGGUUUUGGCU     a
  ||||||||||||||||||||||      
  UUUUCAAUGACGCCAAAACcgg     a
UG                      uaaag 

Annotation confidence Medium

Genome context

chr17: 42494773-42494830 [+]

Disease association

hsa-mir-548at is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-548at-5p

• Accession: MIMAT0022277
• Description: Homo sapiens hsa-miR-548at-5p mature miRNA
• Sequence: 1 - AAAAGUUAUUGCGGUUUUGGCU - 22
• Evidence: experimental ; Illumina [2]

Mature hsa-miR-548at-3p

• Accession: MIMAT0022278
• Description: Homo sapiens hsa-miR-548at-3p mature miRNA
• Sequence: 38 - CAAAACCGCAGUAACUUUUGU - 58
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21911355
   miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades
   "Friedlander MR, Mackowiak SD, Li N, Chen W, Rajewsky N"
   "Nucleic Acids Res (2012) 40:37-52


2. PubMed ID: 21980368
   MicroRNAs associated with metastatic prostate cancer
   Watahiki A, Wang Y, Morris J, Dennis K, O'Dwyer HM, Gleave M, Gout PW, Wang Y
   PLoS One (2011) 6:e24950