Stem-loop sequence mmu-mir-299b

Accession

MI0019180

Description

Mus musculus miR-299b stem-loop

Gene family

MIPF0000186; mir-299

Stem-loop

                     ac 
gguuuaccgucccacauacau  u
|||||||||||||||||||||  c
ccaaauggcaggguguaugua  a
                     aa 

Genome context

• Coordinates (GRCm38): chr12: 109710645-109710693 [-]
• Overlapping transcripts:

  sense

  ENSMUST00000175550 ; AC121784.4-201; exon 1

Clustered miRNAs

< 10kb from mmu-mir-299b

• mmu-mir-667: chr12: 109720006-109720097 [+]
• mmu-mir-495: chr12: 109718754-109718816 [+]
• mmu-mir-543: chr12: 109717258-109717333 [+]
• mmu-mir-666: chr12: 109717085-109717183 [+]
• mmu-mir-1193: chr12: 109715671-109715791 [+]
• mmu-mir-679: chr12: 109715577-109715650 [+]
• mmu-mir-494: chr12: 109715318-109715402 [+]
• mmu-mir-329: chr12: 109713481-109713577 [+]
• mmu-mir-758: chr12: 109712810-109712890 [+]
• mmu-mir-323: chr12: 109712508-109712593 [+]
• mmu-mir-1197: chr12: 109712317-109712436 [+]
• mmu-mir-380: chr12: 109711803-109711863 [+]
• mmu-mir-299b: chr12: 109710645-109710693 [-]
• mmu-mir-299a: chr12: 109710638-109710700 [+]
• mmu-mir-411: chr12: 109710175-109710256 [+]
• mmu-mir-379: chr12: 109709060-109709125 [+]

Mature sequence mmu-miR-299b-5p

• Accession: MIMAT0022836
• Sequence: 1 - gguuuaccgucccacauacau - 21
• Evidence: not experimental
• Predicted targets:
  • DIANA-MICROT:mmu-miR-299b-5p
  • MIRDB:mmu-miR-299b-5p

Mature sequence mmu-miR-299b-3p

• Accession: MIMAT0022837
• Sequence: 32 - uaugugggacgguaaacc - 49
• Evidence: not experimental
• Predicted targets:
  • DIANA-MICROT:mmu-miR-299b-3p
  • MIRDB:mmu-miR-299b-3p

References

1. PMID:21911355 "miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades" Friedlander MR, Mackowiak SD, Li N, Chen W, Rajewsky N Nucleic Acids Res. 40:37-52(2012).