Stem-loop sequence ath-MIR5637

Accession

MI0019209 (change log)

Description

Arabidopsis thaliana miR5637 stem-loop

Stem-loop

   a   c      c     g             -           c    gacucuauaaa          uuuuacugcauuguaugccucuaaaauag 
5'  aga caucuc aaugc caacucuauauuu ccucuauuuua aguu           auauaguuga                             a
    ||| |||||| ||||| ||||||||||||| ||||||||||| ||||           ||||||||||                             g
3'  ucu guagag uuacg guugagauauaaa ggagauaaaau ucaa           uauaucaacu                             g
   a   c      u     g             a           c    ---aucucuua          cgauuauuuucucguuagagauguaaaaa 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (TAIR10; GCA_000001735.1): chr2: 12270179-12270373 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0019209

Mature sequence ath-miR5637

• Accession: MIMAT0022397
• Sequence: 13 - aaugcgcaacucuauauuucc - 33
• Evidence: experimental; Illumina [1]

References

1. PMID:21940835 "High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis" Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN Genome Res. 22:163-176(2012).