Stem-loop ath-MIR5650

Accession

MI0019227

Description

Arabidopsis thaliana ath-MIR5650 precursor miRNA

Sequence

auUUGUUUUGGAUCUUAGAUACAcauauaguuugcuuuuccuuuauaaacaaacuauauguguaucuaagauucaaaacaaac
.(((((((((((((((((((((((((((((((((.(((........)))))))))))))))))))))))))))))))))))).

Structure

a                                 c   ucc 
 uUUGUUUUGGAUCUUAGAUACAcauauaguuug uuu   u
 ||||||||||||||||||||||||||||||||| |||    
 aaacaaaacuuagaaucuauguguauaucaaac aaa   u
c                                 -   uau 

Annotation confidence Not enough data

Genome context

chr2: 19686957-19687039 [+]

Mature ath-miR5650

• Accession: MIMAT0022416
• Description: Arabidopsis thaliana ath-miR5650 mature miRNA
• Sequence: 3 - UUGUUUUGGAUCUUAGAUACA - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21940835
   High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis
   "Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN"
   "Genome Res (2012) 22:163-176