Stem-loop ath-MIR5658

Accession

MI0019242

Description

Arabidopsis thaliana ath-MIR5658 precursor miRNA

Sequence

agAUGAUGAUGAUGAUGAUGAAAcagaaucaguaagaagcuucuucuucuuaggaggaggaggaagauugguuucaucaucaucaccaguugaa
......((.(((((((((((((((..((((.........((((((((((....))))))))))..)))).))))))))))))))).))......

Structure

agAUGA  A               ag    aguaagaag          u 
      UG UGAUGAUGAUGAAAc  aauc         cuucuucuuc u
      || |||||||||||||||  ||||         ||||||||||  
      ac acuacuacuacuuug  uuag         ggaggaggag a
aaguug  c               -g    -------aa          g 

Annotation confidence Not enough data

Genome context

chr4: 18485438-18485531 [-]

Mature ath-miR5658

• Accession: MIMAT0022431
• Description: Arabidopsis thaliana ath-miR5658 mature miRNA
• Sequence: 3 - AUGAUGAUGAUGAUGAUGAAA - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21940835
   High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis
   "Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN"
   "Genome Res (2012) 22:163-176