Stem-loop ath-MIR5661

Accession

MI0019249

Description

Arabidopsis thaliana ath-MIR5661 precursor miRNA

Sequence

uaAGAGGUACAUCAUGUAGUCUGaaaugguuuugcuguacucuuugcuucugacauuucuugcugcauugucuacuucugu
..(((((((.((.(((((((..((((((.....((..........))......))))))..))))))).)).)))))))..

Structure

ua       C  C       CU      -guuuu  ugua 
  AGAGGUA AU AUGUAGU  Gaaaug      gc    c
  ||||||| || |||||||  ||||||      ||     
  ucuucau ug uacgucg  cuuuac      cg    u
ug       c  u       uu      agucuu  uuuc 

Annotation confidence Not enough data

Genome context

chr4: 10449329-10449409 [+]

Mature ath-miR5661

• Accession: MIMAT0022438
• Description: Arabidopsis thaliana ath-miR5661 mature miRNA
• Sequence: 3 - AGAGGUACAUCAUGUAGUCUG - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21940835
   High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis
   "Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN"
   "Genome Res (2012) 22:163-176