Stem-loop sequence ath-MIR5663

Accession

MI0019251 (change log)

Description

Arabidopsis thaliana miR5663 stem-loop

Stem-loop

   u                               auucuaguauauaguaacauuau 
5'  uauagcuaaggauuugcauucucaugauuga                       a
    |||||||||||||||||||||||||||||||                        
3'  auaucgauuccuaaacguaagaguacuaacu                       g
   u                               caaaucacaaauaucugaaagaa 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (TAIR10; GCA_000001735.1): chr1: 18686855-18686966 [-]
• Overlapping transcripts:

  intergenic

Database links

• RNAcentral:URS00007A6A97_3702
• miRBase Tracker:MI0019251

Mature sequence ath-miR5663-5p

• Accession: MIMAT0022440
• Previous IDs: ath-miR5663
• Sequence: 5 - agcuaaggauuugcauucuca - 25
• Evidence: experimental; Illumina [1]

Mature sequence ath-miR5663-3p

• Accession: MIMAT0032129
• Sequence: 88 - ugagaaugcaaauccuuagcu - 108
• Evidence: not experimental

References

1. PMID:21940835 "High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis" Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN Genome Res. 22:163-176(2012).