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miRBase |
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Stem-loop sequence ath-MIR5645f |
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Accession | MI0019252 (change log) | ||||
Description | Arabidopsis thaliana miR5645f stem-loop | ||||
Gene family | MIPF0001280; MIR5645 | ||||
Stem-loop |
- uau u a a g uc c c cuc a c c cucguuuugucuguugaaacaaauuuaaacccuaaaucccuaaaucgauuucauuaucugcgauuuugaggucaauguggg 5' cggaagacaaauaaaucg aguuuuuguug uuuuc aaauaaaugacaa guuuuuguuga uugucauuugag augucguuaaguagguuaa agaauuuuuuuacggcguuaaugucu guuuau cu uguuagaacaaaacaacguu uu auugcag u |||||||||||||||||| ||||||||||| ||||| ||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||| || |||||||||||||||||||| || ||||||| 3' gucuucuguuuauuuagc ucaaaaacaac gaaag uuuauuuacuguu caaaaacaacu aacgguaaacuc uauaguaauuuauucaauu uuuuaaaaaaaugccgcaauuacaga caaaua ga acaaucuuguuuuguugcag aa uaacguc c u ugu u c - g -- - a aau a c a ucugcuuugcugcaacaaaacagaaaacuuuguuuauauuugggauuaaaggguuuaacuaaaguaauagaguuuuagucu |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence ath-miR5645f |
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Accession | MIMAT0022441 |
Sequence |
71 - auuugagucaugucguuaag - 90 |
Evidence | experimental; Illumina [1] |
References |
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1 |
PMID:21940835
"High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis"
Genome Res. 22:163-176(2012).
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