Stem-loop ath-MIR5666

Accession

MI0019255

Description

Arabidopsis thaliana ath-MIR5666 precursor miRNA

Sequence

auuaaaugcucgauauuccauguugaaaccuuaucagguaaaaaugaaggaccugacaaaguuucaccAUGGGACAUCGAGCAUUUAAU
((((((((((((((.(((((((.((((((.((.((((((...........)))))).)).)))))).))))))).))))))))))))))

Structure

              a       u      c  a      aaaa 
auuaaaugcucgau uuccaug ugaaac uu ucaggu    a
|||||||||||||| ||||||| |||||| || ||||||    u
UAAUUUACGAGCUA AGGGUAc acuuug aa agucca    g
              C       c      a  c      ggaa 

Annotation confidence Not enough data

Genome context

chr1: 12035047-12035135 [+]

Mature ath-miR5666

• Accession: MIMAT0022444
• Description: Arabidopsis thaliana ath-miR5666 mature miRNA
• Sequence: 69 - AUGGGACAUCGAGCAUUUAAU - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21940835
   High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis
   "Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN"
   "Genome Res (2012) 22:163-176