Stem-loop sequence bra-MIR5654a

Accession MI0019321
Description Brassica rapa miR5654a stem-loop
Gene family MIPF0001454; MIR5654
Stem-loop 
uaa   -ug     -   cu   cguuucu  uuc  -u          --uc   uauua                          cc    u    c  ga 
   uga   uauug uag  cug       ug   gu  cacucuuuug    agg     acaagauaaaucccaagcaucaucca  uuau agcc uu  a
   |||   ||||| |||  |||       ||   ||  ||||||||||    |||     ||||||||||||||||||||||||||  |||| |||| ||   
   acu   guaac auc  gau       ac   cg  gugagaaaau    ucc     uguuuuauuuaggguucguaguaggu  aaug ucgg ag  c
-ag   uua     c   ag   -------  cuc  uu          cuuc   ucuca                          aa    u    a  ua
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Mature sequence bra-miR5654a

Accession MIMAT0023007
Sequence

62 -  

auaaaucccaagcaucaucca

 - 82

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Evidence experimental; Solexa [1]

References

1
PMID:22025521 "Identification of conserved and novel microRNAs that are responsive to heat stress in Brassica rapa" Yu X, Wang H, Lu Y, de Ruiter M, Cariaso M, Prins M, van Tunen A, He Y J Exp Bot. 63:1025-1038(2012).