Stem-loop bra-MIR5723

Accession

MI0019336

Description

Brassica rapa bra-MIR5723 precursor miRNA

Literature search

1 open access papers mention bra-MIR5723
(1 sentences)

Sequence

gcuauggacuuccaccuucgugaAAUGUGCUGCAAUAUCUCUGCaaacauuguuuuuuuucauuugcuuuugugcuguaucauuugauagauggcuauaaacuagauuaguuuucugcagagauauugcagcacauuucacgaagguggaauuccauagcaca
((((((((.((((((((((((((((((((((((((((((((((((....................((......))..((((....))))((.(((((..........))))).)))))))))))))))))))))))))))))))))))))).))))))))...

Structure

---        c                                    aacauuguuuuuuuucauuugcuuuugugcuguaucauuugaua  u     uaaa 
   gcuaugga uuccaccuucgugaAAUGUGCUGCAAUAUCUCUGCa                                            ga ggcua    c
   |||||||| ||||||||||||||||||||||||||||||||||||                                            || |||||     
   cgauaccu aagguggaagcacuuuacacgacguuauagagacgu                                            cu uugau    u
aca        u                                    --------------------------------------------  u     uaga 

Annotation confidence Not enough data

Genome context

chrA2: 22331161-22331323 [-]

Mature bra-miR5723

• Accession: MIMAT0023022
• Description: Brassica rapa bra-miR5723 mature miRNA
• Sequence: 24 - AAUGUGCUGCAAUAUCUCUGC - 44
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22025521
   Identification of conserved and novel microRNAs that are responsive to heat stress in Brassica rapa
   "Yu X, Wang H, Lu Y, de Ruiter M, Cariaso M, Prins M, van Tunen A, He Y"
   "J Exp Bot (2012) 63:1025-1038