Stem-loop ssl-MIR156

Accession

MI0019340

Description

Salvia sclarea ssl-MIR156 precursor miRNA

Gene family

MIPF0000008; MIR156

Sequence

UGACAGAAGAGAGUGAGCACAcgcaggcaauuguauauggaguaugccuuuguggaugcgugugcucacuucuuuucuguca
(((((((((((((((((((((((((.((((..((((((...))))))..))))...))))))))))))).))))))))))))

Structure

            -             --g    uu      g 
UGACAGAAGAGA GUGAGCACAcgca   gcaa  guauau  
|||||||||||| |||||||||||||   ||||  |||||| g
acugucuuuucu cacucgugugcgu   uguu  cguaug  
            u             agg    uc      a 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssl-miR156

• Accession: MIMAT0022506
• Description: Salvia sclarea ssl-miR156 mature miRNA
• Sequence: 1 - UGACAGAAGAGAGUGAGCACA - 21
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19840835
   One-step identification of conserved miRNAs, their targets, potential transcription factors and effector genes of complete secondary metabolism pathways after 454 pyrosequencing of calyx cDNAs from the Labiate Salvia sclarea L
   "Legrand S, Valot N, Nicole F, Moja S, Baudino S, Jullien F, Magnard JL, Caissard JC, Legendre L"
   "Gene (2010) 450:55-62