miRBase entry: ssl-MIR164a

Stem-loop ssl-MIR164a


Accession
MI0019341
Description
Salvia sclarea ssl-MIR164a precursor miRNA
Gene family
MIPF0000045; MIR164


Sequence

UGGAGAAGCAGGGCACGUGCAauacuaacucacacacaaacaagacguuuucagacaccuucacacgcgugaaagaguuaguucuucaugugcccaucuucgcca
(((.((((..(((((((((....((((((((.(((.(....(((..(((....)))..))).....).)))...))))))))....)))))))))..)))).)))

Structure
   A    CA         CAau        --a   a -aaac   ac   u 
UGG GAAG  GGGCACGUG    acuaacuc   cac c     aag  guu u
||| ||||  |||||||||    ||||||||   ||| |     |||  |||  
acc cuuc  cccguguac    ugauugag   gug g     uuc  cag c
   g    ua         uucu        aaa   c cacac   ca   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssl-miR164a

Accession MIMAT0022507
Description Salvia sclarea ssl-miR164a mature miRNA
Sequence 1 - UGGAGAAGCAGGGCACGUGCA - 21
Evidence experimental
454 [1]

References

  1. PubMed ID: 19840835
    One-step identification of conserved miRNAs, their targets, potential transcription factors and effector genes of complete secondary metabolism pathways after 454 pyrosequencing of calyx cDNAs from the Labiate Salvia sclarea L
    "Legrand S, Valot N, Nicole F, Moja S, Baudino S, Jullien F, Magnard JL, Caissard JC, Legendre L"
    "Gene (2010) 450:55-62